The detailed information of tRNA gene sequence


Sequence ID>ENV09000687
Genome IDABSP01015473
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethane_C1
Species
Start position on genome 850
End posion on genome 935
Amino Acid Leu
Anticodon GAG
Upstream region at tRNA start position 
accgattttt
tRNA gene sequence 
GCCCAAGTGGTGGAACCTGGTAGACACGCTATCTTGAGGGGGTAGTGGCGAGAGCCGTGC
CGGTTCAAGTCCGGCCTTGGGCACCA
Downstream region at tRNA end position 
tctgnnnnnn
Secondary structure (Cloverleaf model)
>ENV09000687	Leu	GAG
                   t      ACCA tctgnnnnnn
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     A - T
                     G - C          T G
                    T     C G G C C     A
    C C A A        G      | | | | |     A
  T         G G T G       G C C G G     C
  G           | | |                 T T
  G         A C A C
    T A G          G     TGGCGAGAGCCGT
                    C - G
                    T - A
                    A - T
                    T + G
                    C - G
                  T       G
                  T       G
                    G A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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