The detailed information of tRNA gene sequence


Sequence ID>ENV09000689
Genome IDABSP01015568
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethane_C1
Species
Start position on genome 629
End posion on genome 554
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ccagtttgat
tRNA gene sequence 
GGGGCTGTAGCTCAGTTGGTAGAGCGCCAGCTTTGCAAGCTGGATGTCGTCGGTTCGACT
CCGATCAGCTCCACCA
Downstream region at tRNA end position 
gatgttccgg
Secondary structure (Cloverleaf model)
>ENV09000689	Ala	TGC
                   t      ACCA gatgttccgg
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          T C
                    T     T A G C C     A
      T G A        A      + | | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     ATGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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