The detailed information of tRNA gene sequence


Sequence ID>ENV09000696
Genome IDABSP01016327
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethane_C1
Species
Start position on genome 260
End posion on genome 184
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
tcggagggat
tRNA gene sequence 
GGGCGATTAGCTCAGATGGTTAGAGTACCTGCTTGACATGCAGGGGGTCACTGGTTCAAG
TCCAGTATCGCCCACCA
Downstream region at tRNA end position 
tatttctccc
Secondary structure (Cloverleaf model)
>ENV09000696	Val	GAC
                   t      ACCA tatttctccc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          T G
                    T     T G A C C     A
      A G A        A      | | | | |     A
    T       C T C G       A C T G G     C
    G       | | | +                 T T
    G       G A G T
      T T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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