The detailed information of tRNA gene sequence


Sequence ID>ENV09000714
Genome IDABSP01021748
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethane_C1
Species
Start position on genome 153
End posion on genome 229
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gaccttgcac
tRNA gene sequence 
GGCGGAGTAGCTCAGCCTGGCAGAGCAAGCGGCTCATAATCGCTGTGTCGCCGGTTCAAG
TCCGGCCTCCGCTACCA
Downstream region at tRNA end position 
gacccggtgt
Secondary structure (Cloverleaf model)
>ENV09000714	Met	CAT
                   c      ACCA gacccggtgt
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C G G C C     A
      C G A        A      | | | | |     A
    C       C T C G       G C C G G     C
    T       | | | |                 T T
    G       G A G C
      G C A        A     GTGTC
                    A - T
                    G - C
                    C - G
                    G - C
                    G + T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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