The detailed information of tRNA gene sequence


Sequence ID>ENV09000717
Genome IDABSP01022705
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethane_C1
Species
Start position on genome 652
End posion on genome 723
Amino Acid Pseudo
Anticodon TTC
Upstream region at tRNA start position 
aaacgataaa
tRNA gene sequence 
ATCTTATTCGTCTAAAGGTTAGGACCTCTCTTTTTCACAGAGAAAATATGAGTTCAATTC
TCATATAAGATAtaa
Downstream region at tRNA end position 
cagaacatat
Secondary structure (Cloverleaf model)
>ENV09000717	Pseudo	TTC
                   a      Ataa cagaacatat
                     A - T
                     T - A
                     C - G
                     T - A
                     T - A
                     A - T
                     T - A          T T
                    T     T A C T C     A
      A A A        C      | | | | |     A
    G       T C T G       A T G A G     C
    G       + | | |                 T T
    T       G G A C
      T A          C     AAAT
                    T - A
                    C - G
                    T - A
                    C - G
                    T - A
                  T       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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