The detailed information of tRNA gene sequence


Sequence ID>ENV09000729
Genome IDABSP01024269
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethane_C1
Species
Start position on genome 655
End posion on genome 579
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
cccattattt
tRNA gene sequence 
GCGCCCGTAGCTCAGCTGGATAGAGTGTTGGTTTCCGAAGCCAAAGGTCGTGGGTTCGAC
TCCCGCCGGGCGCACCA
Downstream region at tRNA end position 
tgtttatcaa
Secondary structure (Cloverleaf model)
>ENV09000729	Arg	CCG
                   t      ACCA tgtttatcaa
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T C
                    T     C G C C C     A
      C G A        A      | + | | |     G
    T       C T C G       G T G G G     C
    G       | | | +                 T T
    G       G A G T
      A T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    T + G
                  T       A
                  T       A
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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