The detailed information of tRNA gene sequence


Sequence ID>ENV09000732
Genome IDABSP01024857
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethane_C1
Species
Start position on genome 185
End posion on genome 110
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
gtctttgaat
tRNA gene sequence 
GGGGTCGTAGCTCAGTTGGTAGAGCACCACAATGGCATTGTGGGGGTCAGGGGTTCGAAT
CCCCTCGGCTCCACCA
Downstream region at tRNA end position 
ttcgacgcgc
Secondary structure (Cloverleaf model)
>ENV09000732	Ala	GGC
                   t      ACCA ttcgacgcgc
                     G - C
                     G - C
                     G + T
                     G - C
                     T + G
                     C - G
                     G - C          T A
                    T     T C C C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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