The detailed information of tRNA gene sequence


Sequence ID>ENV09000800
Genome IDABSP01040144
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethane_C1
Species
Start position on genome 187
End posion on genome 263
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
cccgacggat
tRNA gene sequence 
GGGCGGGTAGCTCAGTTGGATAGAGCGTTGGCCTCCGAAGCCAAAGGTCGTGGGTTCGAT
CCCCGCCTCGCCTACCA
Downstream region at tRNA end position 
tcctctttta
Secondary structure (Cloverleaf model)
>ENV09000800	Arg	CCG
                   t      ACCA tcctctttta
                     G + T
                     G - C
                     G - C
                     C - G
                     G - C
                     G + T
                     G - C          C T
                    T     C G C C C     A
      T G A        A      | + | | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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