The detailed information of tRNA gene sequence


Sequence ID>ENV09000816
Genome IDABSP01043932
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethane_C1
Species
Start position on genome 466
End posion on genome 391
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgcctcgcgt
tRNA gene sequence 
GGCCAGTTAGCTCAGTGGTTAGAGCAGCGGAATCATAATCCGTTGGTCCGGGGTTCAAAT
CCCTGACTGGCCACCA
Downstream region at tRNA end position 
ccgattcgac
Secondary structure (Cloverleaf model)
>ENV09000816	Met	CAT
                   t      ACCA ccgattcgac
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C
                     T - A          T A
                    T     G T C C C     A
      T G A        A      | + | | |     A
    G       C T C G       C G G G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     TGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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