The detailed information of tRNA gene sequence


Sequence ID>ENV09000818
Genome IDABSP01044002
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethane_C1
Species
Start position on genome 174
End posion on genome 82
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aagcagacac
tRNA gene sequence 
GGAGAGATGGCCGAGTAGGTCGAAGGCGCTCGCCTGCTAAGCGAGTATACTGGGAAACCG
GTATCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
tttatttcca
Secondary structure (Cloverleaf model)
>ENV09000818	Ser	GCT
                   c      GCCA tttatttcca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    A T G A        G      | | | | |     G
  G         G C C G       G A G G G     C
  G           | | |                 T T
  T         A G G C
    C G A          G     TATACTGGGAAACCGGTATC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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