The detailed information of tRNA gene sequence


Sequence ID>ENV09000822
Genome IDABSP01044820
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethane_C1
Species
Start position on genome 251
End posion on genome 175
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctaaggtttc
tRNA gene sequence 
GGGCCTGTAGCTCAGCTGGTTAGAGCAGAGGACTCATAATCCTTTGGTCGTCGGTTCAAG
TCCGACCGGGCCCACCT
Downstream region at tRNA end position 
aatataaaaa
Secondary structure (Cloverleaf model)
>ENV09000822	Met	CAT
                   c      ACCT aatataaaaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C A G C C     A
      C G A        A      | | | | |     A
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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