The detailed information of tRNA gene sequence


Sequence ID>ENV09000823
Genome IDABSP01045917
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethane_C1
Species
Start position on genome 469
End posion on genome 544
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
tgcctcacac
tRNA gene sequence 
GGACGATTAGCTCAGTTGGCAGAGCACCGGCCTCACATGCCGGGGGTCACTGGTTCAAGT
CCAGTATCGTCCACCA
Downstream region at tRNA end position 
tttccggcgc
Secondary structure (Cloverleaf model)
>ENV09000823	Val	CAC
                   c      ACCA tttccggcgc
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C
                     A - T
                     T - A          T G
                    T     T G A C C     A
      T G A        A      | | | | |     A
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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