The detailed information of tRNA gene sequence


Sequence ID>ENV09000828
Genome IDABSP01046369
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethane_C1
Species
Start position on genome 239
End posion on genome 315
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aagtttacaa
tRNA gene sequence 
GGTGATGTAGCTCAGCTGGTTAGAGCACAGGATTCATAATCCTGGGGTCGAGGGTTCAAG
TCCCTCTTTCACCACCA
Downstream region at tRNA end position 
ataaagacgc
Secondary structure (Cloverleaf model)
>ENV09000828	Met	CAT
                   a      ACCA ataaagacgc
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     T   T
                     G + T          T G
                    T     C T C C C     A
      C G A        A      | | | | |     A
    T       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    A - T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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