The detailed information of tRNA gene sequence


Sequence ID>ENV09000846
Genome IDABSP01049237
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethane_C1
Species
Start position on genome 579
End posion on genome 503
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tcctcggntt
tRNA gene sequence 
GGGCCCATAGCTCAGTTGGTCAGAGCCACCGGCTCATAACCGGTTGGTCCCTGGTTCGAG
GCCAGGTGGGCCCACCA
Downstream region at tRNA end position 
atattgccgt
Secondary structure (Cloverleaf model)
>ENV09000846	Met	CAT
                   t      ACCA atattgccgt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          G G
                    T     G G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        C     TGGTC
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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