The detailed information of tRNA gene sequence


Sequence ID>ENV09000869
Genome IDABSP01053571
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethane_C1
Species
Start position on genome 407
End posion on genome 483
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
tgtaacacct
tRNA gene sequence 
CGGGGTGTAGCTCAGCCTGGTAGAGTACTGCGTTCGGGACGCAGGAGTCGGAGGTTCAAA
TCCTCTCACCCCGACCA
Downstream region at tRNA end position 
tcttcttgcc
Secondary structure (Cloverleaf model)
>ENV09000869	Pro	CGG
                   t      ACCA tcttcttgcc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     A
    C       C T C G       G G A G G     C
    T       | | | +                 T T
    G       G A G T
      G T A        A     GAGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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