The detailed information of tRNA gene sequence


Sequence ID>ENV09000871
Genome IDABSP01054256
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethane_C1
Species
Start position on genome 29
End posion on genome 104
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
ctcacctagt
tRNA gene sequence 
GCTGGTGTAGCTCAGTCGGTAGAGCAACACATTCGTAATGTGTGGGTCGGCGGTTCGATT
CCGCCTACCAGCTCCA
Downstream region at tRNA end position 
tattataaaa
Secondary structure (Cloverleaf model)
>ENV09000871	Thr	CGT
                   t      TCCA tattataaaa
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C
                     T - A
                     G + T          T T
                    T     C C G C C     A
      T G A        A      | | | | |     G
    C       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    A - T
                    C - G
                    A - T
                    C - G
                    A - T
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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