The detailed information of tRNA gene sequence


Sequence ID>ENV09000874
Genome IDABSP01054516
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethane_C1
Species
Start position on genome 580
End posion on genome 504
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
catcttaaaa
tRNA gene sequence 
GTCCTCGTGGCGCAACTGGATAGCGCAGCCCCCTCCTAAGGGGCAGGTTGTAGGTTCGAT
TCCTATCGGGGACACCA
Downstream region at tRNA end position 
cccagcttta
Secondary structure (Cloverleaf model)
>ENV09000874	Arg	CCT
                   a      ACCA cccagcttta
                     G - C
                     T - A
                     C - G
                     C - G
                     T + G
                     C - G
                     G - C          T T
                    T     T A T C C     A
      C A A        G      + | | | |     G
    T       C G C G       G T A G G     C
    G       | | | |                 T T
    G       G C G C
      A T A        A     AGGTT
                    G - C
                    C - G
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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