The detailed information of tRNA gene sequence


Sequence ID>ENV09000875
Genome IDABSP01054534
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethane_C1
Species
Start position on genome 847
End posion on genome 751
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tccaatgcaa
tRNA gene sequence 
GGAAGCGGATGGGGCGCTGGTGGCCCCCCCCGGACTTCAAATCCGGTCGGGAGNCGGAAA
CGTCTCCGGTGGGTTCGATTCCCTCACGCTTCCGCCA
Downstream region at tRNA end position 
aacttcatcc
Secondary structure (Cloverleaf model)
>ENV09000875	SeC	TCA
                   a      GCCA aacttcatcc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C
                     G   A          T T
                    A     C T C C C     A
    T C G C        T      |   | | |     G
  G         G G G G       G T G G G     C
  G         | | | |                 T T
  T         C C C C
    G G C          C     TCGGGAGNCGGAAACGTCTCCG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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