The detailed information of tRNA gene sequence


Sequence ID>ENV09000878
Genome IDABSP01055166
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethane_C1
Species
Start position on genome 33
End posion on genome 109
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
cggtccggtg
tRNA gene sequence 
GGGCGCGTAGCTCAGCTGGTTAGAGCATGCGCTTGATAAGCGCAGGGTCATAGGTTCGAA
TCCTATCGCGCCCACCA
Downstream region at tRNA end position 
gttcttccat
Secondary structure (Cloverleaf model)
>ENV09000878	Ile	GAT
                   g      ACCA gttcttccat
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C          T A
                    T     T A T C C     A
      C G A        A      | | | | |     G
    T       C T C G       A T A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    T - A
                    G - C
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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