The detailed information of tRNA gene sequence


Sequence ID>ENV09000886
Genome IDABSP01056798
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethane_C1
Species
Start position on genome 817
End posion on genome 743
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
gcgttggatt
tRNA gene sequence 
GGCGTGTTCGTCTATCGGTTAGGACACGGCCCTCTCAAGGCTGAAAGACGGGTTCGATTC
CCGTACGCGCTACCA
Downstream region at tRNA end position 
acctcgcttt
Secondary structure (Cloverleaf model)
>ENV09000886	Glu	CTC
                   t      ACCA acctcgcttt
                     G + T
                     G - C
                     C - G
                     G - C
                     T + G
                     G - C
                     T - A          T T
                    T     T G C C C     A
      C T A        C      | | | | |     G
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          A     AAAG
                    C - G
                    G + T
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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