The detailed information of tRNA gene sequence


Sequence ID>ENV09000889
Genome IDABSP01057014
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethane_C1
Species
Start position on genome 626
End posion on genome 538
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
ttacttgttt
tRNA gene sequence 
GCCTTGGTGGTGGAACTGGTAGACACGCAGGACTTAAAATCCTGTTTGCAGCAATGCAAG
TGCGGGTTCGATTCCCGCCTGAGGCACAA
Downstream region at tRNA end position 
atcgaaaaag
Secondary structure (Cloverleaf model)
>ENV09000889	Leu	TAA
                   t      ACAA atcgaaaaag
                     G - C
                     C - G
                     C - G
                     T - A
                     T + G
                     G + T
                     G - C          T T
                    T     C G C C C     A
      C A A        G      | | | | |     G
    T       G G T G       G C G G G     C
    G         | | |                 T T
    G       A C A C
      T A G        G     TTTGCAGCAATGCAAGT
                    C - G
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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