The detailed information of tRNA gene sequence


Sequence ID>ENV09000897
Genome IDABSP01058045
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethane_C1
Species
Start position on genome 293
End posion on genome 201
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cgcctcatgc
tRNA gene sequence 
GGAGAGGTGCTGGAGTGGCTGAACAGGACAGATTGCTAATCTGTTGTAGGGGGTAAACCT
CTACCGGGGGTTCGAATCCCCCCCTCTCCGCCA
Downstream region at tRNA end position 
gccgctgagc
Secondary structure (Cloverleaf model)
>ENV09000897	Ser	GCT
                   c      GCCA gccgctgagc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G G T C       G G G G G     C
    G         | | |                 T T
    C       A C A G
      T G A        G     TGTAGGGGGTAAACCTCTACC
                    A - T
                    C - G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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