The detailed information of tRNA gene sequence


Sequence ID>ENV09000907
Genome IDABSP01059190
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethane_C1
Species
Start position on genome 667
End posion on genome 575
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tgctcgccac
tRNA gene sequence 
GGAGGCGTCCGGACTCCTGGTGGGTCCCCCGGTCTTCAAAACCGGTGGAGGGGCGGAAGC
TCCTCGGCGGGTTCGATTCCCGTCCGCCTCCGCta
Downstream region at tRNA end position 
gatcacactg
Secondary structure (Cloverleaf model)
>ENV09000907	SeC	TCA
                   c      GCta gatcacactg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     T   C          T T
                    C     T G C C C     A
      C C T        C      + | | | |     G
    T       C A G G       G C G G G     C
    G       | | | |                 T T
    G       G T C C
      T G G        C     TGGAGGGGCGGAAGCTCCTCG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK