The detailed information of tRNA gene sequence


Sequence ID>ENV09000945
Genome IDABSQ01001688
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethenol_C1
Species
Start position on genome 690
End posion on genome 616
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gggccgccac
tRNA gene sequence 
GGCGGAGTAGCTCAGTGGTAGAGCAGGGGACTCATAAGCCCTTGGTCGGTGGTTCAAATC
CGCCCTCCGCTACCA
Downstream region at tRNA end position 
gacaccgtgt
Secondary structure (Cloverleaf model)
>ENV09000945	Met	CAT
                   c      ACCA gacaccgtgt
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C C G C C     A
        G A        A      | | + | |     A
      T     C T C G       G G T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     TGGTC
                    G + T
                    G - C
                    G - C
                    G - C
                    A   G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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