The detailed information of tRNA gene sequence


Sequence ID>ENV09000960
Genome IDABSQ01002461
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethenol_C1
Species
Start position on genome 1187
End posion on genome 1259
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ggcgatttta
tRNA gene sequence 
GGGCCTGTAGCTCATCTGGTAGAGCGTCTGCTTTGCAAGCAGAGGGTACGGAGTTCGACT
CTCCTCAGGTCCAggc
Downstream region at tRNA end position 
ataaatcatt
Secondary structure (Cloverleaf model)
>ENV09000960	Ala	TGC
                   a      Aggc ataaatcatt
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     T - A
                     G - C          T C
                    T     T C C T C     A
      C T A        A        | | | |     G
    T       C T C G       C G G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     GGGTA
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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