The detailed information of tRNA gene sequence


Sequence ID>ENV09000978
Genome IDABSQ01007266
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethenol_C1
Species
Start position on genome 215
End posion on genome 125
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gccaccctgc
tRNA gene sequence 
GGAGGGATGGATGAGCGGTTTAAGTCGCACGCCTGGAAAGCGTGTGGGGGTTAACAGCCC
CCCGCGGGTTCGAATCCCGCTCCCTCCGCCA
Downstream region at tRNA end position 
gatacgtcgg
Secondary structure (Cloverleaf model)
>ENV09000978	Ser	GGA
                   c      GCCA gatacgtcgg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C G C C C     A
      C G A        G      | | | | |     G
    G       G T A G       G C G G G     C
    G         + | |                 T T
    T       A G T C
      T T A        G     TGGGGGTTAACAGCCCCCC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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