The detailed information of tRNA gene sequence


Sequence ID>ENV09000980
Genome IDABSQ01007346
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethenol_C1
Species
Start position on genome 423
End posion on genome 351
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttcgtcttcc
tRNA gene sequence 
GGGCCCGTAGCTCAGCGGTCAGAGCAGGGGACTCATAATCCCTTGGTCGTAGGTTCGATC
CCTACCGGGCCTAttt
Downstream region at tRNA end position 
tcccaaccac
Secondary structure (Cloverleaf model)
>ENV09000980	Met	CAT
                   c      Attt tcccaaccac
                     G + T
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          C T
                    T     C A T C C     A
      C G A        A      | | | | |     G
    G       C T C G       G T A G G     C
    G       | | | |                 T T
    T       G A G C
      C A          A     TGGTC
                    G + T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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