The detailed information of tRNA gene sequence


Sequence ID>ENV09000982
Genome IDABSQ01008794
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethenol_C1
Species
Start position on genome 279
End posion on genome 190
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tgcggcttgt
tRNA gene sequence 
GGAGAGGTGGCTGAGCGGTCGAAAGCGGCGGTCTTGAAAACCGTTGAGGGTTGATCCCCT
CCCAGGGTTCGAATCCCTGCTTCTCCGCCA
Downstream region at tRNA end position 
ttcaatcaaa
Secondary structure (Cloverleaf model)
>ENV09000982	Ser	TGA
                   t      GCCA ttcaatcaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G + T
                     G - C          T A
                    T     G T C C C     A
      C G A        G      | | | | |     G
    G       G T C G       C A G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TGAGGGTTGATCCCCTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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