The detailed information of tRNA gene sequence


Sequence ID>ENV09000985
Genome IDABSQ01009709
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethenol_C1
Species
Start position on genome 561
End posion on genome 486
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
aaacattctc
tRNA gene sequence 
GGGGCTATAGCTCAGTTGGTAGAGCGCTTCCATGGCATGGAAGAGGTCAGGAGTTCGATT
CTCCTTAGCTCCACAA
Downstream region at tRNA end position 
gtcggtaccc
Secondary structure (Cloverleaf model)
>ENV09000985	Ala	GGC
                   c      ACAA gtcggtaccc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     A - T          T T
                    T     T C C T C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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