The detailed information of tRNA gene sequence


Sequence ID>ENV09000998
Genome IDABSQ01013161
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethenol_C1
Species
Start position on genome 613
End posion on genome 710
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gagagcgaac
tRNA gene sequence 
GGAAGCGCATGGGGCCCGGTGGCCCTCCCGGTCTTCAAAACCGCGTGTCGGGCGGCTTCG
CCGTCCGGGGTGGGTTCGACTCCCACGCACTTCCGCCA
Downstream region at tRNA end position 
aggagcaggt
Secondary structure (Cloverleaf model)
>ENV09000998	SeC	TCA
                   c      GCCA aggagcaggt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C   A
                     G - C
                     C - G          T C
                    A     C A C C C     A
      C C C        T      | | | | |     G
    G       G G G G       G T G G G     C
    G       | | | +                 T T
    T       C C C T
      G G          C     GTGTCGGGCGGCTTCGCCGTCCGGG
                    C   C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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