The detailed information of tRNA gene sequence


Sequence ID>ENV09001006
Genome IDABSQ01014579
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethenol_C1
Species
Start position on genome 217
End posion on genome 126
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tgcggcccgc
tRNA gene sequence 
GGAGGGGTGTCAGAGTCCGGTTGAATGAGCCTGACTCGAAATCAGGTGTGCTCGAAAGGG
CACCGGGGGTTCGAATCCCTCCCCCTCCGCCA
Downstream region at tRNA end position 
attgaatcaa
Secondary structure (Cloverleaf model)
>ENV09001006	Ser	CGA
                   c      GCCA attgaatcaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
    C T G A        G      | + | | |     G
  C         G A C T       G G G G G     C
  G           | | |                 T T
  G         A T G A
    T T G A        G     TGTGCTCGAAAGGGCACC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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