The detailed information of tRNA gene sequence


Sequence ID>ENV09001017
Genome IDABSQ01016250
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethenol_C1
Species
Start position on genome 361
End posion on genome 288
Amino Acid Ile
Anticodon TAT
Upstream region at tRNA start position 
ttccgttgcg
tRNA gene sequence 
CCTCCCTTAGCTCAGTGGCCAGAGCGTGGGCCTTATAAGCCCGCGGTCGTGGGTTCGATT
CCCGCAGGGAGGACtc
Downstream region at tRNA end position 
ccgaacgcac
Secondary structure (Cloverleaf model)
>ENV09001017	Ile	TAT
                   g      ACtc ccgaacgcac
                     C - G
                     C - G
                     T - A
                     C - G
                     C - G
                     C - G
                     T - A          T T
                    T     C G C C C     A
      T G A        A      | + | | |     G
    G       C T C G       G T G G G     C
    G       | | | |                 T T
    C       G A G C
      C A          G     CGGTC
                    T + G
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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