The detailed information of tRNA gene sequence


Sequence ID>ENV09001031
Genome IDABSQ01018935
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethenol_C1
Species
Start position on genome 658
End posion on genome 582
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aacacccctc
tRNA gene sequence 
GGCGGGGTAGCTCAGTCGGTTAGAGCACACGGCTCATAATCGTGGTGTCGCGGGTTCGAG
TCCCGCCCCCGCTACCA
Downstream region at tRNA end position 
gacgaatcac
Secondary structure (Cloverleaf model)
>ENV09001031	Met	CAT
                   c      ACCA gacgaatcac
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     C G C C C     A
      T G A        A      | | | | |     G
    C       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    G + T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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