The detailed information of tRNA gene sequence


Sequence ID>ENV09001073
Genome IDABSQ01027478
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethenol_C1
Species
Start position on genome 398
End posion on genome 475
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gttcgcgcgg
tRNA gene sequence 
AGGGCAGTAGCTCCAATCGGTTAGAGCGACTGATTCCAAATCAGTAGGTTCGGGGTTCGA
ATCCCTGCTGCCCTGCCA
Downstream region at tRNA end position 
gagcgccccg
Secondary structure (Cloverleaf model)
>ENV09001073	Trp	CCA
                   g      GCCA gagcgccccg
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C          T A
                    T     G T C C C     A
    T A A C        A      | + | | |     G
  C         C T C G       C G G G G     C
  G         | | | |                 T T
  G         G A G C
    T T A          G     AGGTT
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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