The detailed information of tRNA gene sequence


Sequence ID>ENV09001088
Genome IDABSQ01030761
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethenol_C1
Species
Start position on genome 388
End posion on genome 477
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ggctccctcc
tRNA gene sequence 
GGGAGGATGGCCGAGCGGACGAAGGCGACGGTCTTGAAAACCGTTGATGGGGCAACTCAT
CCGTGGGTTCGAATCCCACTCCTCCCGCCA
Downstream region at tRNA end position 
gacctcgtgc
Secondary structure (Cloverleaf model)
>ENV09001088	Ser	TGA
                   c      GCCA gacctcgtgc
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    A       A G G C
      C G A        G     TGATGGGGCAACTCATCC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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