The detailed information of tRNA gene sequence


Sequence ID>W2030021990
Genome IDMGRV01000326
Search identical group
Phylum/ClassDeltaproteobacteria
SpeciesDeltaproteobacteria bacterium RIFCSPLOWO2_01_FULL_42_9 [MGRV]
Start position on genome 799
End posion on genome 894
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ttgcctctta
tRNA gene sequence 
GGAAGGGGATATGGCCCGGTGGCCCTGCCAGTCTTCAAAACTGTGCTGTCCTGCTCAAGC
GGGATGGGTGGGTTCGACTCCCTCCTCCTTCCGCCA
Downstream region at tRNA end position 
agaattatta
Secondary structure (Cloverleaf model)
>W2030021990	SeC	TCA
                   a      GCCA agaattatta
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G + T
                     G - C          T C
                    A     C T C C C     A
      C C C        T      |   | | |     G
    G       G G T A       G T G G G     C
    G       | |   |                 T T
    T       C C C T
      G G          G     GCTGTCCTGCTCAAGCGGGATGG
                    C   T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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