The detailed information of tRNA gene sequence


Sequence ID>ENV09001105
Genome IDABSQ01032562
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethenol_C1
Species
Start position on genome 103
End posion on genome 9
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gcaccgacac
tRNA gene sequence 
GGAGAAGGATGGGGCCCGGTGGTCCTCCCGGTCTTCAAAACCGCGTGGTCCCCCGAAAGG
GGGACGGAAGGTTCGACTCCTTCCCTTCTCCGCCA
Downstream region at tRNA end position 
atcaatgann
Secondary structure (Cloverleaf model)
>ENV09001105	SeC	TCA
                   c      GCCA atcaatgann
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C          T C
                    A     C T T C C     A
      C C C        T      | | | | |     G
    G       G G G G       G A A G G     C
    G       + | | +                 T T
    T       T C C T
      G G          C     GTGGTCCCCCGAAAGGGGGACG
                    C   C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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