The detailed information of tRNA gene sequence


Sequence ID>ENV09001149
Genome IDABSQ01039145
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethenol_C1
Species
Start position on genome 61
End posion on genome 136
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
catcgaaaaa
tRNA gene sequence 
GGGCCCGTAGCTCAGCGGTTAGAGCAGGGGACTCATAATCCCTTGGTCGCCTGTTCGAAT
CAGGCCGGGCCTATCA
Downstream region at tRNA end position 
taagtgattt
Secondary structure (Cloverleaf model)
>ENV09001149	Met	CAT
                   a      ATCA taagtgattt
                     G + T
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C G G A C     A
      C G A        A      | | | | |     G
    G       C T C G       G C C T G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     TGGTC
                    G + T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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