The detailed information of tRNA gene sequence


Sequence ID>ENV09001150
Genome IDABSQ01039189
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethenol_C1
Species
Start position on genome 346
End posion on genome 253
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cggccacgac
tRNA gene sequence 
GGAGCTGTGGCCGAGTGGCTGAAGGCGGCGGTTTGCTAAACCGTTATACGGCCTCAAAGC
CGTATCGAGGGTTCGAATCCCTCCGGCTCCGCCA
Downstream region at tRNA end position 
gcgccgtttt
Secondary structure (Cloverleaf model)
>ENV09001150	Ser	GCT
                   c      GCCA gcgccgtttt
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     T + G
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATACGGCCTCAAAGCCGTATC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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