The detailed information of tRNA gene sequence


Sequence ID>ENV09001152
Genome IDABSQ01039564
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethenol_C1
Species
Start position on genome 641
End posion on genome 717
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
cgccgacagg
tRNA gene sequence 
GCCGCATTCGTCTAGAGGCCCAGGACACCGCCCTCTCAAGGCGGAGATCATCGGTTCGAA
TCCGATATGCGGTACCA
Downstream region at tRNA end position 
acccctggct
Secondary structure (Cloverleaf model)
>ENV09001152	Glu	CTC
                   g      ACCA acccctggct
                     G + T
                     C - G
                     C - G
                     G - C
                     C - G
                     A - T
                     T - A          T A
                    T     T A G C C     A
      A G A        C      | | | | |     G
    G       T C T G       A T C G G     C
    G       + | | |                 T T
    C       G G A C
      C C A        A     AGATC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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