The detailed information of tRNA gene sequence


Sequence ID>ENV09001156
Genome IDABSQ01040395
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethenol_C1
Species
Start position on genome 666
End posion on genome 577
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
actcgtcgac
tRNA gene sequence 
GGTGGCCTGCCCGAGCGGCCGAAGGGACACGCCTGGAAAGCGTGTAGGGGGGCAACTCTC
TCGAGGGTTCGAATCCCTCGGCCACCGCCA
Downstream region at tRNA end position 
gatcgagcct
Secondary structure (Cloverleaf model)
>ENV09001156	Ser	GGA
                   c      GCCA gatcgagcct
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     C - G
                     C - G          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C C       G A G G G     C
    G         | | |                 T T
    C       A G G G
      C G A        A     TAGGGGGGCAACTCTCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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