The detailed information of tRNA gene sequence


Sequence ID>ENV09001159
Genome IDABSQ01040946
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethenol_C1
Species
Start position on genome 78
End posion on genome 5
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
aattgaataa
tRNA gene sequence 
GGTATCGTGGCCGAGAGGCGAGGCATCGGTCTGCAAAACCGAGTACAGCGGTTCGAATCC
GCTCGATACCTCAA
Downstream region at tRNA end position 
aaaannnnnn
Secondary structure (Cloverleaf model)
>ENV09001159	Cys	GCA
                   a      TCAA aaaannnnnn
                     G - C
                     G - C
                     T - A
                     A - T
                     T - A
                     C - G
                     G - C          T A
                    T     T C G C C     A
        G A        G      | | | | |     G
      A     G C C G       A G C G G     C
      G       | | |                 T T
      G     A G G C
        C G        A     GTAC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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