The detailed information of tRNA gene sequence


Sequence ID>W2030029711
Genome IDOUND01000006
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesArsenophonus endosymbiont of Aleurodicus floccissimus ARAF [OUND]
Start position on genome 37989
End posion on genome 38083
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
atttttccat
tRNA gene sequence 
GGAAGATCATGGTCCCCGGTGGGGTGGCTGGACTTCAAATCCAGATGGAGCCGCCGACGG
TCCTTGGCAGGTTCAACTCCTATGGTCTTCCACCA
Downstream region at tRNA end position 
ttcccaatct
Secondary structure (Cloverleaf model)
>W2030029711	SeC	TCA
                   t      ACCA ttcccaatct
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     T + G
                     C - G          T C
                    A     T A T C C     A
      C C C        T      +   | | |     A
    G       C T G G       G C A G G     C
    G       | + +                   T T
    T       G G T G
      G G          G     ATGGAGCCGCCGACGGTCCTTG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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