The detailed information of tRNA gene sequence


Sequence ID>ENV09001164
Genome IDABSQ01042186
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethenol_C1
Species
Start position on genome 323
End posion on genome 396
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctcgcattcg
tRNA gene sequence 
GGCGGCGTAGCTCAGTTGGTTAGAGCACCGGCTTCATAAGCCGGGTGTCGGCGGTTCAAG
TCCGCCCGCCGCTAatc
Downstream region at tRNA end position 
tctcctttga
Secondary structure (Cloverleaf model)
>ENV09001164	Met	CAT
                   g      Aatc tctcctttga
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C C G C C     A
      T G A        A      | | | | |     A
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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