The detailed information of tRNA gene sequence


Sequence ID>ENV09001167
Genome IDABSQ01042692
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethenol_C1
Species
Start position on genome 51
End posion on genome 142
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ctgtcgcgac
tRNA gene sequence 
GGAGAGGTCGCATAGAGGTCTAGTGCAGCGGTTTGCTAAACCGCCATGTGGGGTAACCTG
CATCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gccccagcgg
Secondary structure (Cloverleaf model)
>ENV09001167	Ser	GCT
                   c      GCCA gccccagcgg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      A G A        C      | | | | |     G
    G       T A C G       G A G G G     C
    G       + | | |                 T T
    T       G T G C
      C T A        A     CATGTGGGGTAACCTGCATC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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