The detailed information of tRNA gene sequence


Sequence ID>ENV09001169
Genome IDABSQ01042745
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethenol_C1
Species
Start position on genome 354
End posion on genome 428
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cgtgacccct
tRNA gene sequence 
AGGGGAGTAGCTCAACGGTAGAGCATCCGTCTCCAAAGCGGAGGGCTATGGGTTCAAATC
CCTTCTCCCCTGCCA
Downstream region at tRNA end position 
cctggcctgc
Secondary structure (Cloverleaf model)
>ENV09001169	Trp	CCA
                   t      GCCA cctggcctgc
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T T C C C     A
        A A        A      |   | | |     A
      C     C T C G       A T G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGCT
                    T - A
                    C - G
                    C - G
                    G - C
                    T + G
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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