The detailed information of tRNA gene sequence


Sequence ID>ENV09001178
Genome IDABSQ01044387
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethenol_C1
Species
Start position on genome 191
End posion on genome 120
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ccacaaaaaa
tRNA gene sequence 
ACGGGTGTGGTGCAATGGTAGCATACCGGTCTCCAAAACCGTTGATGGGAGTTCGAATCT
CTCCACCCGTGCag
Downstream region at tRNA end position 
aatgaagtta
Secondary structure (Cloverleaf model)
>ENV09001178	Trp	CCA
                   a      GCag aatgaagtta
                     A - T
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C T C T C     A
        A A        G      | + | | |     G
      T     C G T G       G G G A G     C
      G     | | | +                 T T
      G     G C A T
        T A        A     TGAT
                    C   T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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