The detailed information of tRNA gene sequence


Sequence ID>ENV09001183
Genome IDABSQ01044401
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethenol_C1
Species
Start position on genome 567
End posion on genome 484
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
gctcgtcgga
tRNA gene sequence 
GCCGGGGTGGAGAAATGGTAGACTCGGGGGTCTCAAAAGCCCCTTCCTTCGCGGGAGTGT
CGGTTCGAGTCCGACCCCCGGCACgc
Downstream region at tRNA end position 
gaagtcagag
Secondary structure (Cloverleaf model)
>ENV09001183	Leu	CAA
                   a      ACgc gaagtcagag
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     C A G C C     A
      T A A        G      | | | | |     G
    G       A G A G       G T C G G     C
    G         | | |                 T T
    T       A C T C
      A G          G     TTCCTTCGCGGGAGT
                    G - C
                    G - C
                    G - C
                    G - C
                    T + G
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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