The detailed information of tRNA gene sequence


Sequence ID>ENV09001185
Genome IDABSQ01044974
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethenol_C1
Species
Start position on genome 448
End posion on genome 373
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
cttttgcaat
tRNA gene sequence 
GGCGCGTTCGTCTAGAGGCCTAGGACACAGCCCTCTCAAGGCTGGTACACGGGTTCGAAT
CCCGTACGCGCTACCA
Downstream region at tRNA end position 
ttccaaaaac
Secondary structure (Cloverleaf model)
>ENV09001185	Glu	CTC
                   t      ACCA ttccaaaaac
                     G + T
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     T - A          T A
                    T     T G C C C     A
      A G A        C      | | | | |     G
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     GTAC
                    C - G
                    A - T
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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