The detailed information of tRNA gene sequence


Sequence ID>ENV09001187
Genome IDABSQ01045052
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethenol_C1
Species
Start position on genome 244
End posion on genome 168
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tcggcaccgg
tRNA gene sequence 
AGGCGCGTAGCTCAATTTGGCAGAGCTCTGGTCTCCAAAACCAGTGGTTGTCGGTTCGAG
TCCGGCCGCGCCTGCCA
Downstream region at tRNA end position 
tccccaccat
Secondary structure (Cloverleaf model)
>ENV09001187	Trp	CCA
                   g      GCCA tccccaccat
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C          T G
                    T     C G G C C     A
      T A A        A      | + | | |     G
    T       C T C G       G T C G G     C
    T       | | | |                 T T
    G       G A G C
      G C A        T     TGGTT
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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